Installation

pipeGEM supports Python 3.10 and newer.

Install from PyPI

pip install pipegem

Install from source

git clone https://github.com/qwerty239qwe/pipeGEM.git
cd pipeGEM
uv sync

Optional extras

Install documentation dependencies when building these docs locally:

uv run --extra doc mkdocs build --strict -d ./docs

DLKcat support requires additional machine-learning and cheminformatics dependencies:

uv sync --extra dlkcat

Check the installation

pipeGEM --version
pipeGEM --help

In Python:

import pipeGEM as pg

print(pg.__version__)